KEGG PATHWAY: Nitrogen metabolism - Reference pathway
The core nitrogen cycle involves four reduction pathways and two oxidation pathways. Nitrogen fixation [MD: M00175 ] is the process of reducing atmospheric molecular nitrogen to ammonia, a biologically useful reduced form incorporated into amino acids and other vital compounds.
KEGG PATHWAY: map00910
The core nitrogen cycle involves four reduction pathways and two oxidation pathways. Nitrogen fixation [MD: M00175 ] is the process of reducing atmospheric molecular nitrogen to ammonia, a biologically useful reduced form incorporated into amino acids and other vital compounds.
KEGG PATHWAY: hsa00910 - GenomeNet
The ability of fixing atmospheric nitrogen by the nitrogenase enzyme complex is present in restricted prokaryotes (diazotrophs). The other reduction pathways are assimilatory nitrate reduction [MD: M00531 ] and dissimilatory nitrate reduction [MD: M00530 ] both for conversion to ammonia, and denitrification [MD: M00529 ].
Nitrogen cycle - Reference pathway - KEGG
This map is essentially the same as map00910 Nitrogen metabolism, but an emphasis here is how chemical compounds are transformed as a biogeochemical cycle and how different organisms are involved in specific transformation processes. KEGG module M numbers are shown for individual transformation steps and Taxonomy mapping of these M numbers ...
Metagenomics analysis identifies nitrogen metabolic pathway …
2021年5月1日 · Metagenomics analysis revealed that the preferred metabolic pathway of nitrogen was from ammonium to glutamate via glutamine, and the enzymes governing this transformation were glutamine synthetase and glutamate synthetase; while in nitrate based amendment, the conversion from nitrite to ammonium was restrained by …
Nitrogen metabolism potential in biofilm microbial communities ...
2024年2月1日 · Metagenomic analysis revealed that nitrogen metabolism microorganisms were primarily composed of Proteobacteria, Planctomycetota, Bacteroidota, and Firmicutes. KEGG results indicated the presence of complete nitrogen metabolism pathways within the biofilm.
KEGG_NITROGEN_METABOLISM - GSEA-MSigDB
The content of the gene sets in the KEGG_LEGACY collection has not been updated since KEGG restricted their usage terms in 2011. More recent sets are available in the KEGG_MEDICUS collection, derived from KEGG's openly available MEDICUS subset.
Comparative Genomics of Nitrogen Cycling Pathways in Bacteria …
2018年8月13日 · In this study, the distribution of 11 nitrogen metabolism (N-cycling) pathways (Fig. 1) was quantified among over 6000 complete prokaryotic genomes. Nitrogen metabolism (N-cycling) genes based on KEGG database annotations [ 20 ] were obtained from 6384 bacterial and 252 archaeal finished genomes in the Integrated Microbial genomes (IMG ...
Metagenomic insights into microbial nitrogen metabolism in two …
2022年10月1日 · There were six core pathways involved in nitrogen metabolism based on KEGG, including nitrogen fixation, assimilatory nitrate reduction, dissimilatory nitrate reduction, denitrification, nitrification and anammox.
Nitrogen metabolism KEGG pathways including a nitrification, b ...
To elucidate the key microbes and their function in nitrogen-transforming, microbial diversity and clusters of orthologous groups (COGs) in composting materials were evaluated using metagenomic...